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Fold Uni-molecular and Bi-molecular Species Visual OMP's integrated DNA and RNA folding engine is the state-of-the-art. Based on hundreds of experiments, it is the only engine to include sequence dependent hairpin thermodynamics so OMP identifies hairpin formations that other solutions miss. In addition to finding the "optimal" structure, OMP can calculate "sub-optimal" structures to confirm the suitability of a binding site (see right two windows in the graphic).
Select Target Positions Visually Visualizing structure makes it easy to identify favorable binding sites. Use Visual OMP to select the Target Position and automatically add the right probe to your experiment.
Identify Potential PCR Problems Primers that fold such that polymerases can begin adding necleosides add noise to your experiment. Visual OMP helps you identify this potential problem and avoid it. Tolerances for Target Overhand and Min Template present are adjusted in the Settings window.

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