The problem with high throughput PCR assay design

It is difficult to design high throughput PCR assays with sensitivity and specificity due to the limitations of a laptop computer.

Solving high throughput PCR assay design with PCR script software

Perform your designs in-silco using the server application OMP-DE (Oligonucleotide Modeling Platform, Developers Edition).  OMP-DE has a command line interface with an API that is fully programmable using Perl scripts.

Oligonucleotide Modeling Platform

  • Access to high-performance computing clusters
  • Combines the science of nucleic acid thermodynamics with in silico target and query modeling and simulation
  • Modeling platform can be configured to include ThermoBLAST and modified backbones and nucleotides
  • OMP is the engine that powers Visual OMP and ThermoBLAST
  • Get Visual OMP as part of the OMP DE package to visualize OMP output files.