Probe Design and Analysis

Using Visual OMP‘s cross-hybridization grid a user may visually inspect all heterodimer interactions between oligos in seconds, and determine the problem probes and targets that are not functioning as predicted due to significant cross-hybridization or mishybridization.

The cross-hybridization grid may be filtered so that a user may color customize the interactions of importance. In the figure below all of the intended hybridization from this microarray probe is labeled by green boxes.

probe design and analysis