3′-Quenchers:
BHQ-1 (Black Hole Quencher 1)
BHQ-2 (Black Hole Quencher 2)
Dabcyl
Iowa Black FQ 420-620 max 531
Iowa Black RQ 500-700 max 656
QSY 7 amine
QSY 9 hydrazide
QSY 35 methylamine
5′ Fluorophores:
Alexa Fluor 350 cadaverine
Alexa Fluor 430 cadaverine
Alexa Fluor 488 cadaverine
Alexa Fluor 532 cadaverine
Alexa Fluor 546 cadaverine
Alexa Fluor 568 cadaverine
Alexa Fluor 594 cadaverine
Alexa Fluor 633 cadaverine
Alexa Fluor 660 cadaverine
Alexa Fluor 680 cadaverine
Bodipy 630/650-X NHS Ester
Bodipy 650/665-X NHS Ester
7-diethylaminocoumarin-3-carboxylic acid
Cy-2 (Cyanine 2)
Cy-3 (Cyanine 3)
Cy-3.5 (Cyanine 3.5)
Cy-5 (Cyanine 5)
Cy-5.5 (Cyanine 5.5)
Cycler 640
DY547
DY647
DY677
FAM (Fluorescein Amidite)
HEX (Hexachlorofluorescein)
VIC
Dimethoxyfluorescein
Lissamine
MGB (Minor Groove Binder)
Oregon Green 488-X NHS Ester
Oregon Green 514 NHS Ester
Pyrene
Rhodamine Green NHS Ester
Rhodamine Red NHS Ester
6-carboxy-X-rhodamine
Carboxytetramethylrhodamine
TET (Tetrachlorofluorescein)
Texas 615
Texas Red cadaverine
Texas Red-OO
TYE 563
TYE 665